Assessing the Relationship Between Mass Window Width and Retention Time Scheduling on Protein Coverage for Data-Independent Acquisition | SpringerLink
Data-Independent Acquisition: A Superior Technique in Mass Spectrometry? | Technology Networks
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics | Nature Communications
SWATH-MS – Institute of Molecular Systems Biology | ETH Zurich
Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry | Nature Communications
Mass spectrometry and proteomics
SWATH analysis - Why an advantage in mass spectrometry?
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics | Nature Communications
Quantifying Plant Dynamic Proteomes by SWATH-based Mass Spectrometry: Trends in Plant Science
Mass-spectrometric exploration of proteome structure and function | Nature
Optimization of Experimental Parameters in Data-Independent Mass Spectrometry Significantly Increases Depth and Reproducibility
DIA mass spectrometry | Nature Methods
SWATH mass spectrometry as a tool for quantitative profiling of the matrisome - ScienceDirect
Prosit: proteome-wide prediction of peptide tandem mass spectra by deep learning | Nature Methods
DDIA: data dependent-independent acquisition proteomics - DDA and DIA in a single LC-MS/MS run | bioRxiv
Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry | Nature Communications
Data-independent acquisition mass spectrometry (DIA-MS) for proteomic applications in oncology - Molecular Omics (RSC Publishing) DOI:10.1039/D0MO00072H
PulseDIA: in-depth data independent acquisition mass spectrometry using enhanced gas phase fractionation | bioRxiv
Rapid and site-specific deep phosphoproteome profiling by data-independent acquisition without the need for spectral libraries | Nature Communications
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics | Nature Communications
Group-DIA: analyzing multiple data-independent acquisition mass spectrometry data files | Nature Methods
Machine Learning in Mass Spectrometric Analysis of DIA Data - Xu - - PROTEOMICS - Wiley Online Library
